Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.6□□□□□ -0.39
Col5a1O88207 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.6□□□□□ -0.39
Col5a1O88207 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.6□□□□□ -0.39
Col5a1O88207 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.6□□□□□ -0.39
Col5a1O88207 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a1O88207 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.59□□□□□ -0.39
Col5a1O88207 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.59□□□□□ -0.39
Col5a1O88207 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.59□□□□□ -0.39
Col5a1O88207 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC12.59□□□□□ -0.39
Col5a1O88207 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col5a1O88207 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Gm16177-201ENSMUST00000120728 718 ntBASIC12.59□□□□□ -0.39
Col5a1O88207 Gm13342-201ENSMUST00000121055 207 ntBASIC12.59□□□□□ -0.39
Col5a1O88207 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.59□□□□□ -0.39
Col5a1O88207 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.59□□□□□ -0.39
Col5a1O88207 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.59□□□□□ -0.39
Col5a1O88207 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.59□□□□□ -0.39
Col5a1O88207 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col5a1O88207 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a1O88207 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a1O88207 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a1O88207 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a1O88207 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Col5a1O88207 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col5a1O88207 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.58□□□□□ -0.4
Col5a1O88207 Mir877-201ENSMUST00000104738 85 ntBASIC12.58□□□□□ -0.4
Col5a1O88207 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Col5a1O88207 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.58□□□□□ -0.4
Col5a1O88207 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col5a1O88207 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.58□□□□□ -0.4
Col5a1O88207 Cts7-204ENSMUST00000225321 1257 ntBASIC12.58□□□□□ -0.4
Col5a1O88207 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col5a1O88207 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.58□□□□□ -0.4
Col5a1O88207 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col5a1O88207 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Col5a1O88207 Gm12384-201ENSMUST00000119228 919 ntBASIC12.58□□□□□ -0.4
Col5a1O88207 Gm11793-201ENSMUST00000120433 981 ntBASIC12.58□□□□□ -0.4
Col5a1O88207 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Gm19309-201ENSMUST00000218295 205 ntBASIC12.58□□□□□ -0.4
Col5a1O88207 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.58□□□□□ -0.4
Col5a1O88207 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a1O88207 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col5a1O88207 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col5a1O88207 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col5a1O88207 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col5a1O88207 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.57□□□□□ -0.4
Col5a1O88207 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.57□□□□□ -0.4
Col5a1O88207 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col5a1O88207 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.57□□□□□ -0.4
Col5a1O88207 Gm22331-201ENSMUST00000158066 136 ntBASIC12.57□□□□□ -0.4
Col5a1O88207 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms