Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcnu1O54982 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcnu1O54982 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Kcnu1O54982 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcnu1O54982 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcnu1O54982 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Kcnu1O54982 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Kcnu1O54982 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcnu1O54982 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Kcnu1O54982 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Kcnu1O54982 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Kcnu1O54982 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Kcnu1O54982 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Kcnu1O54982 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Kcnu1O54982 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Kcnu1O54982 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Kcnu1O54982 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Kcnu1O54982 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.08■□□□□ 0
Kcnu1O54982 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Kcnu1O54982 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Kcnu1O54982 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Kcnu1O54982 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.08■□□□□ 0
Kcnu1O54982 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.08■□□□□ 0
Kcnu1O54982 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.08■□□□□ 0
Kcnu1O54982 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.08■□□□□ 0
Kcnu1O54982 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.08■□□□□ 0
Kcnu1O54982 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.08■□□□□ 0
Kcnu1O54982 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.08■□□□□ 0
Kcnu1O54982 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.08■□□□□ 0
Kcnu1O54982 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Kcnu1O54982 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Kcnu1O54982 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Kcnu1O54982 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.08■□□□□ 0
Kcnu1O54982 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Kcnu1O54982 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.08■□□□□ 0
Kcnu1O54982 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Kcnu1O54982 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Kcnu1O54982 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Kcnu1O54982 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Kcnu1O54982 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.07■□□□□ 0
Kcnu1O54982 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.07■□□□□ 0
Kcnu1O54982 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Kcnu1O54982 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.07■□□□□ 0
Kcnu1O54982 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.07■□□□□ 0
Kcnu1O54982 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.07■□□□□ 0
Kcnu1O54982 Gm43474-201ENSMUST00000196415 774 ntBASIC15.07■□□□□ 0
Kcnu1O54982 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Kcnu1O54982 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.07■□□□□ 0
Kcnu1O54982 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.07■□□□□ 0
Kcnu1O54982 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.07■□□□□ 0
Kcnu1O54982 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Kcnu1O54982 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Kcnu1O54982 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Kcnu1O54982 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.06■□□□□ 0
Kcnu1O54982 Gm25287-201ENSMUST00000103846 110 ntBASIC15.06■□□□□ 0
Kcnu1O54982 Gm22918-201ENSMUST00000103855 110 ntBASIC15.06■□□□□ 0
Kcnu1O54982 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.06■□□□□ 0
Kcnu1O54982 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.06■□□□□ 0
Kcnu1O54982 Gm14822-201ENSMUST00000122247 291 ntBASIC15.06■□□□□ 0
Kcnu1O54982 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.06■□□□□ 0
Kcnu1O54982 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.06■□□□□ 0
Kcnu1O54982 Gm27631-201ENSMUST00000184163 466 ntBASIC15.06■□□□□ 0
Kcnu1O54982 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.06■□□□□ 0
Kcnu1O54982 Gm18766-201ENSMUST00000189811 808 ntBASIC15.06■□□□□ 0
Kcnu1O54982 Gm18049-201ENSMUST00000208909 581 ntBASIC15.06■□□□□ 0
Kcnu1O54982 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Kcnu1O54982 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms