Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Per1O35973 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.32■□□□□ 0.04
Per1O35973 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.32■□□□□ 0.04
Per1O35973 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.32■□□□□ 0.04
Per1O35973 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Per1O35973 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Per1O35973 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Per1O35973 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per1O35973 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.31■□□□□ 0.04
Per1O35973 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Per1O35973 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Per1O35973 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Per1O35973 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Per1O35973 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Per1O35973 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.31■□□□□ 0.04
Per1O35973 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Per1O35973 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.31■□□□□ 0.04
Per1O35973 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.31■□□□□ 0.04
Per1O35973 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.31■□□□□ 0.04
Per1O35973 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.31■□□□□ 0.04
Per1O35973 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Per1O35973 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.31■□□□□ 0.04
Per1O35973 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per1O35973 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Per1O35973 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.3■□□□□ 0.04
Per1O35973 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Per1O35973 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.3■□□□□ 0.04
Per1O35973 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.3■□□□□ 0.04
Per1O35973 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.3■□□□□ 0.04
Per1O35973 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Per1O35973 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.3■□□□□ 0.04
Per1O35973 Gm45668-201ENSMUST00000211271 493 ntBASIC15.3■□□□□ 0.04
Per1O35973 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.3■□□□□ 0.04
Per1O35973 Gm19220-201ENSMUST00000222682 803 ntBASIC15.3■□□□□ 0.04
Per1O35973 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.3■□□□□ 0.04
Per1O35973 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per1O35973 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.29■□□□□ 0.04
Per1O35973 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.29■□□□□ 0.04
Per1O35973 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Per1O35973 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Per1O35973 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Per1O35973 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms