Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Efnb3O35393 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Efnb3O35393 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.21□□□□□ -0.61
Efnb3O35393 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Efnb3O35393 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Efnb3O35393 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.21□□□□□ -0.61
Efnb3O35393 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Efnb3O35393 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.21□□□□□ -0.61
Efnb3O35393 Gm45167-201ENSMUST00000208007 322 ntBASIC11.21□□□□□ -0.61
Efnb3O35393 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Efnb3O35393 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.21□□□□□ -0.61
Efnb3O35393 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Efnb3O35393 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Efnb3O35393 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Efnb3O35393 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Efnb3O35393 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Efnb3O35393 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Efnb3O35393 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.2□□□□□ -0.62
Efnb3O35393 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Efnb3O35393 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.2□□□□□ -0.62
Efnb3O35393 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.2□□□□□ -0.62
Efnb3O35393 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Mir5126-201ENSMUST00000175513 77 ntBASIC11.2□□□□□ -0.62
Efnb3O35393 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.2□□□□□ -0.62
Efnb3O35393 Gm2651-201ENSMUST00000203560 838 ntBASIC11.2□□□□□ -0.62
Efnb3O35393 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.2□□□□□ -0.62
Efnb3O35393 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Efnb3O35393 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Efnb3O35393 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Efnb3O35393 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Efnb3O35393 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Efnb3O35393 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Efnb3O35393 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.19□□□□□ -0.62
Efnb3O35393 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Efnb3O35393 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Efnb3O35393 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.19□□□□□ -0.62
Efnb3O35393 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.19□□□□□ -0.62
Efnb3O35393 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Efnb3O35393 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms