Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.56□□□□□ -0.08
Trove2O08848 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trove2O08848 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.56□□□□□ -0.08
Trove2O08848 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.56□□□□□ -0.08
Trove2O08848 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.56□□□□□ -0.08
Trove2O08848 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trove2O08848 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.56□□□□□ -0.08
Trove2O08848 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.56□□□□□ -0.08
Trove2O08848 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trove2O08848 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trove2O08848 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trove2O08848 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.55□□□□□ -0.08
Trove2O08848 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.55□□□□□ -0.08
Trove2O08848 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Trove2O08848 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trove2O08848 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.54□□□□□ -0.08
Trove2O08848 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Trove2O08848 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trove2O08848 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.54□□□□□ -0.08
Trove2O08848 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trove2O08848 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trove2O08848 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.54□□□□□ -0.08
Trove2O08848 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.54□□□□□ -0.08
Trove2O08848 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.54□□□□□ -0.08
Trove2O08848 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trove2O08848 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Trove2O08848 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.54□□□□□ -0.08
Trove2O08848 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trove2O08848 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trove2O08848 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Trove2O08848 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.53□□□□□ -0.08
Trove2O08848 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trove2O08848 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms