Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Gm37230-201ENSMUST00000194491 818 ntBASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shisa8J3QNX5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.92□□□□□ -0.34
Shisa8J3QNX5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Gm7153-201ENSMUST00000117092 455 ntBASIC12.92□□□□□ -0.34
Shisa8J3QNX5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.92□□□□□ -0.34
Shisa8J3QNX5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shisa8J3QNX5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Gm13597-201ENSMUST00000121239 375 ntBASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shisa8J3QNX5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms