Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Gm9755-201ENSMUST00000032981 1356 ntBASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Gm16177-201ENSMUST00000120728 718 ntBASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcf11G3X9Z4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Gm27682-201ENSMUST00000183930 110 ntBASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcf11G3X9Z4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Gm15198-201ENSMUST00000117283 177 ntBASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcf11G3X9Z4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcf11G3X9Z4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcf11G3X9Z4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcf11G3X9Z4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Gm14350-201ENSMUST00000116642 640 ntBASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Gm40466-201ENSMUST00000212174 422 ntBASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Gm9823-201ENSMUST00000051212 327 ntBASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Gm8399-201ENSMUST00000082300 1117 ntBASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Gm45760-201ENSMUST00000212190 1782 ntBASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Pcf11G3X9Z4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Gm42550-201ENSMUST00000201553 960 ntBASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Rn7sk-201ENSMUST00000083103 331 ntBASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Gm26315-201ENSMUST00000083890 321 ntBASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms