Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Gm7809-201ENSMUST00000153199 742 ntBASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc188F6WEU2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Gm37922-201ENSMUST00000195596 455 ntBASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Gm5051-201ENSMUST00000204085 485 ntBASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Morn2-202ENSMUST00000227729 656 ntBASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc188F6WEU2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms