Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.94■□□□□ 0.3
Ube4aE9Q735 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.93■□□□□ 0.3
Ube4aE9Q735 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Mir698-201ENSMUST00000102164 109 ntBASIC16.93■□□□□ 0.3
Ube4aE9Q735 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.93■□□□□ 0.3
Ube4aE9Q735 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4aE9Q735 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm4984-201ENSMUST00000115987 360 ntBASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm12928-201ENSMUST00000117115 573 ntBASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm12485-201ENSMUST00000119641 291 ntBASIC16.92■□□□□ 0.3
Ube4aE9Q735 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.92■□□□□ 0.3
Ube4aE9Q735 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm7287-201ENSMUST00000205267 602 ntBASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.92■□□□□ 0.3
Ube4aE9Q735 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.92■□□□□ 0.3
Ube4aE9Q735 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4aE9Q735 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.91■□□□□ 0.3
Ube4aE9Q735 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.91■□□□□ 0.3
Ube4aE9Q735 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.91■□□□□ 0.3
Ube4aE9Q735 Gm13689-201ENSMUST00000119360 685 ntBASIC16.91■□□□□ 0.3
Ube4aE9Q735 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ube4aE9Q735 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.91■□□□□ 0.3
Ube4aE9Q735 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.91■□□□□ 0.3
Ube4aE9Q735 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube4aE9Q735 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ube4aE9Q735 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.9■□□□□ 0.3
Ube4aE9Q735 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.9■□□□□ 0.3
Ube4aE9Q735 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms