Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Gm7959-201ENSMUST00000221823 1078 ntBASIC7.71□□□□□ -1.18
Herc1E9PZP8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Gm42471-201ENSMUST00000201457 1865 ntBASIC7.71□□□□□ -1.18
Herc1E9PZP8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Herc1E9PZP8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gm42518-201ENSMUST00000196277 938 ntBASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gm8913-201ENSMUST00000209491 641 ntBASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gm11892-201ENSMUST00000117711 1202 ntBASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gm6506-201ENSMUST00000119775 1136 ntBASIC7.7□□□□□ -1.18
Herc1E9PZP8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC7.7□□□□□ -1.18
Herc1E9PZP8 AC171241.1-201ENSMUST00000228144 1166 ntBASIC7.7□□□□□ -1.18
Herc1E9PZP8 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gm13730-201ENSMUST00000121036 1462 ntBASIC7.7□□□□□ -1.18
Herc1E9PZP8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC7.7□□□□□ -1.18
Herc1E9PZP8 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Gm45310-201ENSMUST00000210436 275 ntBASIC7.7□□□□□ -1.18
Herc1E9PZP8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC7.7□□□□□ -1.18
Herc1E9PZP8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Gm5950-201ENSMUST00000213337 772 ntBASIC7.69□□□□□ -1.18
Herc1E9PZP8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC7.69□□□□□ -1.18
Herc1E9PZP8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Gm9387-201ENSMUST00000098624 1320 ntBASIC7.69□□□□□ -1.18
Herc1E9PZP8 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Herc1E9PZP8 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms