Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.45■□□□□ 0.7
Scaf11E9PZM7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm13859-201ENSMUST00000119936 1423 ntBASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm13730-201ENSMUST00000121036 1462 ntBASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm15370-201ENSMUST00000117158 253 ntBASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm13369-201ENSMUST00000119442 987 ntBASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm37986-201ENSMUST00000193285 383 ntBASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm37497-201ENSMUST00000195830 798 ntBASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm42550-201ENSMUST00000201553 960 ntBASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm10608-202ENSMUST00000213924 676 ntBASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm5161-201ENSMUST00000075243 853 ntBASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf11E9PZM7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Mir6979-201ENSMUST00000183927 56 ntBASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Gm7046-201ENSMUST00000221351 977 ntBASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Gm29787-201ENSMUST00000222129 849 ntBASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scaf11E9PZM7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Gm25668-201ENSMUST00000157700 129 ntBASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Gm4819-201ENSMUST00000182170 1009 ntBASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC19.42■□□□□ 0.7
Scaf11E9PZM7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Gm21769-201ENSMUST00000211922 111 ntBASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scaf11E9PZM7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Gm13297-201ENSMUST00000120205 934 ntBASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Gm24514-201ENSMUST00000174961 285 ntBASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Gm6222-202ENSMUST00000182143 629 ntBASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Itm2b-204ENSMUST00000228637 783 ntBASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC19.41■□□□□ 0.7
Scaf11E9PZM7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Gm3756-201ENSMUST00000169182 1355 ntBASIC19.41■□□□□ 0.7
Scaf11E9PZM7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf11E9PZM7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms