Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Mir1895-201ENSMUST00000122615 79 ntBASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Gm20553-201ENSMUST00000204205 844 ntBASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Chchd1-203ENSMUST00000224633 557 ntBASIC15.51■□□□□ 0.07
Trim30cD3YVI9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim30cD3YVI9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Gm26308-201ENSMUST00000157768 69 ntBASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim30cD3YVI9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Gm16026-204ENSMUST00000162652 683 ntBASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim30cD3YVI9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms