Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Gm9103-201ENSMUST00000119371 405 ntBASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Gm5177-201ENSMUST00000183092 997 ntBASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav12d-1A0N8R0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav12d-1A0N8R0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav12d-1A0N8R0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav12d-1A0N8R0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav12d-1A0N8R0 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.4□□□□□ -0.59
Trav12d-1A0N8R0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav12d-1A0N8R0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav12d-1A0N8R0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav12d-1A0N8R0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Gm12882-201ENSMUST00000121696 517 ntBASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Gm25925-201ENSMUST00000158314 306 ntBASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Gm27301-201ENSMUST00000184012 127 ntBASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Gm27628-201ENSMUST00000184911 107 ntBASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Gm18041-201ENSMUST00000218210 618 ntBASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Gm15590-201ENSMUST00000078419 552 ntBASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12d-1A0N8R0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Gm11452-201ENSMUST00000122376 690 ntBASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Mir8098-201ENSMUST00000184011 137 ntBASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav12d-1A0N8R0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms