Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.83□□□□□ -0.36
Smim17A0A504 Gm14042-201ENSMUST00000120139 833 ntBASIC12.83□□□□□ -0.36
Smim17A0A504 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.83□□□□□ -0.36
Smim17A0A504 Gm9726-201ENSMUST00000180321 678 ntBASIC12.83□□□□□ -0.36
Smim17A0A504 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Smim17A0A504 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smim17A0A504 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.83□□□□□ -0.36
Smim17A0A504 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Smim17A0A504 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Smim17A0A504 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smim17A0A504 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim17A0A504 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.82□□□□□ -0.36
Smim17A0A504 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Smim17A0A504 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.82□□□□□ -0.36
Smim17A0A504 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Gm15358-201ENSMUST00000119249 520 ntBASIC12.82□□□□□ -0.36
Smim17A0A504 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.82□□□□□ -0.36
Smim17A0A504 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Smim17A0A504 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.82□□□□□ -0.36
Smim17A0A504 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Smim17A0A504 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim17A0A504 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.81□□□□□ -0.36
Smim17A0A504 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Smim17A0A504 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.81□□□□□ -0.36
Smim17A0A504 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.81□□□□□ -0.36
Smim17A0A504 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim17A0A504 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Smim17A0A504 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.81□□□□□ -0.36
Smim17A0A504 Gm18032-201ENSMUST00000222541 538 ntBASIC12.81□□□□□ -0.36
Smim17A0A504 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smim17A0A504 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smim17A0A504 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smim17A0A504 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim17A0A504 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms