Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm5682-201ENSMUST00000173402 505 ntBASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.58□□□□□ -0.71
Trav6n-6A0A075B6B2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Trav6n-6A0A075B6B2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm45167-201ENSMUST00000208007 322 ntBASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms