Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gm18489-201ENSMUST00000172565 551 ntBASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gm2451-201ENSMUST00000199447 999 ntBASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gm10290-201ENSMUST00000200451 999 ntBASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav7n-4A0A075B620 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav7n-4A0A075B620 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav7n-4A0A075B620 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms