Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm13823-201ENSMUST00000119930 345 ntBASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Gm6222-201ENSMUST00000120787 396 ntBASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Chchd1-203ENSMUST00000224633 557 ntBASIC14.2□□□□□ -0.14
H2afb2S4R1M3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.2□□□□□ -0.14
H2afb2S4R1M3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Gm15957-201ENSMUST00000118893 974 ntBASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 AA619741-201ENSMUST00000195095 646 ntBASIC14.19□□□□□ -0.14
H2afb2S4R1M3 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb2S4R1M3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm22065-201ENSMUST00000103753 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm22066-201ENSMUST00000103761 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm24932-201ENSMUST00000103763 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm24115-201ENSMUST00000103799 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm22190-201ENSMUST00000103827 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm22191-201ENSMUST00000103831 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm24721-201ENSMUST00000103849 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm28018-201ENSMUST00000103869 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm26399-201ENSMUST00000103937 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm24158-201ENSMUST00000175263 71 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm25349-201ENSMUST00000177728 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm23616-201ENSMUST00000177797 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm25871-201ENSMUST00000177816 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm24752-201ENSMUST00000178240 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm24496-201ENSMUST00000178287 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm25649-201ENSMUST00000178476 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm25548-201ENSMUST00000178681 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm23147-201ENSMUST00000178841 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm26095-201ENSMUST00000179270 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm22171-201ENSMUST00000179283 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm23936-201ENSMUST00000179354 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm22619-201ENSMUST00000179516 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm25255-201ENSMUST00000179579 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm24755-201ENSMUST00000179691 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm26506-201ENSMUST00000179692 110 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms