Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Mrpl40Q9Z2Q5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm43767-201ENSMUST00000198933 381 ntBASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm6888-201ENSMUST00000221983 706 ntBASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Celf4-206ENSMUST00000224553 1729 ntBASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl40Q9Z2Q5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl40Q9Z2Q5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm13015-201ENSMUST00000118674 204 ntBASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.21□□□□□ -0.13
Mrpl40Q9Z2Q5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mrpl40Q9Z2Q5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Mrpl40Q9Z2Q5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mrpl40Q9Z2Q5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mrpl40Q9Z2Q5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.21□□□□□ -0.14
Mrpl40Q9Z2Q5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mrpl40Q9Z2Q5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms