Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Gm43575-201ENSMUST00000196420 516 ntBASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
ClcnkaQ9WUB7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ClcnkaQ9WUB7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.08□□□□□ -0.31
ClcnkaQ9WUB7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ClcnkaQ9WUB7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
ClcnkaQ9WUB7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ClcnkaQ9WUB7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Gm23935-201ENSMUST00000102303 57 ntBASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Gm24270-201ENSMUST00000102326 57 ntBASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Gm24245-201ENSMUST00000157318 57 ntBASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Gm43474-201ENSMUST00000196415 774 ntBASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms