Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Gm10175-202ENSMUST00000208752 441 ntBASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pfdn5Q9WU28 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 AA414768-201ENSMUST00000121924 1257 ntBASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Gm10499-201ENSMUST00000174094 934 ntBASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Gm7506-201ENSMUST00000207758 815 ntBASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfdn5Q9WU28 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.65□□□□□ -0.55
Pfdn5Q9WU28 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pfdn5Q9WU28 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pfdn5Q9WU28 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pfdn5Q9WU28 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pfdn5Q9WU28 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pfdn5Q9WU28 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pfdn5Q9WU28 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pfdn5Q9WU28 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pfdn5Q9WU28 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms