Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Gm18284-201ENSMUST00000172604 624 ntBASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Odf3b-204ENSMUST00000227834 930 ntBASIC11.35□□□□□ -0.59
Smco4Q9JIS3 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco4Q9JIS3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Mir1199-201ENSMUST00000117015 119 ntBASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Gm5643-201ENSMUST00000117081 966 ntBASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Gm10698-201ENSMUST00000182663 604 ntBASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Gm7213-201ENSMUST00000215977 950 ntBASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco4Q9JIS3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Smco4Q9JIS3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Smco4Q9JIS3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Smco4Q9JIS3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Smco4Q9JIS3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms