Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Gm18307-201ENSMUST00000206864 949 ntBASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Gm8131-201ENSMUST00000213783 1570 ntBASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf1Q9EPU4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Gm12416-201ENSMUST00000120911 1008 ntBASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Gm24447-201ENSMUST00000083977 338 ntBASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf1Q9EPU4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Gm43697-201ENSMUST00000199637 2581 ntBASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf1Q9EPU4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Gm13689-201ENSMUST00000119360 685 ntBASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Gm6266-201ENSMUST00000203844 806 ntBASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 AC110817.1-201ENSMUST00000225706 605 ntBASIC19.34■□□□□ 0.69
Cpsf1Q9EPU4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf1Q9EPU4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf1Q9EPU4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf1Q9EPU4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms