Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.83□□□□□ -0.03
Chmp2aQ9DB34 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp2aQ9DB34 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Chmp2aQ9DB34 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp2aQ9DB34 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp2aQ9DB34 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp2aQ9DB34 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp2aQ9DB34 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Gm23547-201ENSMUST00000158210 271 ntBASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2aQ9DB34 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Gm12134-201ENSMUST00000122109 520 ntBASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Gm9719-201ENSMUST00000162765 543 ntBASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp2aQ9DB34 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Gm17837-201ENSMUST00000186435 985 ntBASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms