Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
U2af1Q9D883 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1Q9D883 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
U2af1Q9D883 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.64■□□□□ 0.58
U2af1Q9D883 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
U2af1Q9D883 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
U2af1Q9D883 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
U2af1Q9D883 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.64■□□□□ 0.57
U2af1Q9D883 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.64■□□□□ 0.57
U2af1Q9D883 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.64■□□□□ 0.57
U2af1Q9D883 Gm20445-201ENSMUST00000061905 565 ntBASIC18.64■□□□□ 0.57
U2af1Q9D883 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Mmp14-206ENSMUST00000225641 3238 ntBASIC18.64■□□□□ 0.57
U2af1Q9D883 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1Q9D883 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
U2af1Q9D883 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
U2af1Q9D883 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
U2af1Q9D883 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Gm12585-201ENSMUST00000117307 290 ntBASIC18.63■□□□□ 0.57
U2af1Q9D883 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
U2af1Q9D883 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.63■□□□□ 0.57
U2af1Q9D883 Gm5866-201ENSMUST00000177881 973 ntBASIC18.63■□□□□ 0.57
U2af1Q9D883 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
U2af1Q9D883 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
U2af1Q9D883 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.63■□□□□ 0.57
U2af1Q9D883 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
U2af1Q9D883 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.63■□□□□ 0.57
U2af1Q9D883 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
U2af1Q9D883 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
U2af1Q9D883 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1Q9D883 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.63■□□□□ 0.57
U2af1Q9D883 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
U2af1Q9D883 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.62■□□□□ 0.57
U2af1Q9D883 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.62■□□□□ 0.57
U2af1Q9D883 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.62■□□□□ 0.57
U2af1Q9D883 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
U2af1Q9D883 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
U2af1Q9D883 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Syt7-205ENSMUST00000224135 1557 ntBASIC18.62■□□□□ 0.57
U2af1Q9D883 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.62■□□□□ 0.57
U2af1Q9D883 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
U2af1Q9D883 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1Q9D883 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
U2af1Q9D883 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC18.61■□□□□ 0.57
U2af1Q9D883 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.61■□□□□ 0.57
U2af1Q9D883 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.61■□□□□ 0.57
U2af1Q9D883 Gm21470-201ENSMUST00000187680 696 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms