Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Mir5131-201ENSMUST00000175426 93 ntBASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp5Q9D7S9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp5Q9D7S9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Grk6-205ENSMUST00000224653 2976 ntBASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Gm9385-201ENSMUST00000117563 472 ntBASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Gm15483-201ENSMUST00000120338 456 ntBASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp5Q9D7S9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms