Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Sf3a3Q9D554 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Gm9726-201ENSMUST00000180321 678 ntBASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Gm6296-201ENSMUST00000222599 943 ntBASIC14.36□□□□□ -0.11
Sf3a3Q9D554 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3a3Q9D554 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms