Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Gm37714-201ENSMUST00000194742 342 ntBASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Gm8602-201ENSMUST00000184045 607 ntBASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.85■□□□□ 0.29
Stag1Q9D3E6 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Stag1Q9D3E6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Gm15806-201ENSMUST00000120696 955 ntBASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Gm12134-201ENSMUST00000122109 520 ntBASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stag1Q9D3E6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Stag1Q9D3E6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Stag1Q9D3E6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Stag1Q9D3E6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Gm15678-201ENSMUST00000117573 960 ntBASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.83■□□□□ 0.28
Stag1Q9D3E6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Gm27701-201ENSMUST00000184498 110 ntBASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Mir7654-201ENSMUST00000185082 70 ntBASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Gm25857-201ENSMUST00000082788 129 ntBASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Stag1Q9D3E6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms