Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Grk6-205ENSMUST00000224653 2976 ntBASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ssu72Q9CY97 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ssu72Q9CY97 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ssu72Q9CY97 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Mir7071-201ENSMUST00000184847 69 ntBASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Gm10060-201ENSMUST00000212002 111 ntBASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssu72Q9CY97 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Ank2-226ENSMUST00000189368 339 ntBASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.07□□□□□ -0.16
Ssu72Q9CY97 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.07□□□□□ -0.16
Ssu72Q9CY97 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssu72Q9CY97 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms