Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Gm10305-201ENSMUST00000195331 2475 ntBASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd1lQ9CXF7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Gm7222-201ENSMUST00000117512 906 ntBASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd1lQ9CXF7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Gm11764-201ENSMUST00000120221 623 ntBASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Gm33142-201ENSMUST00000193913 867 ntBASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd1lQ9CXF7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chd1lQ9CXF7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chd1lQ9CXF7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chd1lQ9CXF7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.15
Chd1lQ9CXF7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms