Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Gm13350-201ENSMUST00000120519 479 ntBASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Mir8109-201ENSMUST00000184375 117 ntBASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldnd1Q9CQX5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Gm8810-201ENSMUST00000172895 754 ntBASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Gm7584-201ENSMUST00000175829 940 ntBASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Gm27516-201ENSMUST00000184237 98 ntBASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Gm18473-201ENSMUST00000220543 868 ntBASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Gm24526-201ENSMUST00000082921 158 ntBASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldnd1Q9CQX5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Gm15236-201ENSMUST00000117309 379 ntBASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldnd1Q9CQX5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cldnd1Q9CQX5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms