Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.12□□□□□ -0.15
Trim33Q99PP7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.12□□□□□ -0.15
Trim33Q99PP7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.12□□□□□ -0.15
Trim33Q99PP7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Gm14701-201ENSMUST00000117156 348 ntBASIC14.11□□□□□ -0.15
Trim33Q99PP7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.11□□□□□ -0.15
Trim33Q99PP7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim33Q99PP7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Gm13015-201ENSMUST00000118674 204 ntBASIC14.1□□□□□ -0.15
Trim33Q99PP7 Gm9824-201ENSMUST00000178707 561 ntBASIC14.1□□□□□ -0.15
Trim33Q99PP7 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.1□□□□□ -0.15
Trim33Q99PP7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.1□□□□□ -0.15
Trim33Q99PP7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.1□□□□□ -0.15
Trim33Q99PP7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim33Q99PP7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trim33Q99PP7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim33Q99PP7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms