Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm5866-201ENSMUST00000177881 973 ntBASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd3Q99LE3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Gm29667-201ENSMUST00000190817 490 ntBASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Gm33320-201ENSMUST00000192232 530 ntBASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd3Q99LE3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Gm15321-201ENSMUST00000121290 288 ntBASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Gm24694-201ENSMUST00000180054 110 ntBASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Gm27663-201ENSMUST00000184839 110 ntBASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Gm7730-201ENSMUST00000212486 454 ntBASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Lysmd3Q99LE3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Gm15460-201ENSMUST00000118147 391 ntBASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Gm44855-201ENSMUST00000205725 362 ntBASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd3Q99LE3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms