Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm12957-201ENSMUST00000117835 377 ntBASIC16.3■□□□□ 0.2
Rfc4Q99J62 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.3■□□□□ 0.2
Rfc4Q99J62 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.3■□□□□ 0.2
Rfc4Q99J62 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.3■□□□□ 0.2
Rfc4Q99J62 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.29■□□□□ 0.2
Rfc4Q99J62 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Gm27486-201ENSMUST00000184923 80 ntBASIC16.29■□□□□ 0.2
Rfc4Q99J62 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.29■□□□□ 0.2
Rfc4Q99J62 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfc4Q99J62 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.28■□□□□ 0.2
Rfc4Q99J62 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfc4Q99J62 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Rfc4Q99J62 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfc4Q99J62 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms