Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Gm10766-202ENSMUST00000194123 606 ntBASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha2Q91Y17 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Gm15321-201ENSMUST00000121290 288 ntBASIC15.08■□□□□ 0
Pcdha2Q91Y17 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.08■□□□□ 0
Pcdha2Q91Y17 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.08■□□□□ 0
Pcdha2Q91Y17 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha2Q91Y17 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.07■□□□□ 0
Pcdha2Q91Y17 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha2Q91Y17 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms