Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 AA543401-201ENSMUST00000164248 1269 ntBASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Gm18766-201ENSMUST00000189811 808 ntBASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Gm29541-201ENSMUST00000191351 678 ntBASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdha3Q91Y16 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha3Q91Y16 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha3Q91Y16 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha3Q91Y16 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.83□□□□□ -0.03
Pcdha3Q91Y16 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha3Q91Y16 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha3Q91Y16 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha3Q91Y16 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha3Q91Y16 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm13823-201ENSMUST00000119930 345 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm9719-201ENSMUST00000162765 543 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm29310-201ENSMUST00000185468 696 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm21825-201ENSMUST00000185728 696 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm29109-201ENSMUST00000185895 696 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm21896-201ENSMUST00000186520 696 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm21873-201ENSMUST00000186728 696 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm21794-201ENSMUST00000187056 696 ntBASIC14.83□□□□□ -0.04
Pcdha3Q91Y16 Gm21880-201ENSMUST00000187275 696 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms