Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Gm10275-201ENSMUST00000092620 635 ntBASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha8Q91Y12 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdha8Q91Y12 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdha8Q91Y12 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdha8Q91Y12 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdha8Q91Y12 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.83□□□□□ -0.19
Pcdha8Q91Y12 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdha8Q91Y12 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Pcdha8Q91Y12 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdha8Q91Y12 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Mir6990-201ENSMUST00000183724 91 ntBASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdha8Q91Y12 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha8Q91Y12 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha8Q91Y12 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha8Q91Y12 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha8Q91Y12 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pcdha8Q91Y12 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha8Q91Y12 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha8Q91Y12 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha8Q91Y12 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdha8Q91Y12 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms