Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha9Q91Y11 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdha9Q91Y11 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha9Q91Y11 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha9Q91Y11 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Gm9229-201ENSMUST00000222777 126 ntBASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha9Q91Y11 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdha9Q91Y11 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Pcdha9Q91Y11 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdha9Q91Y11 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdha9Q91Y11 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdha9Q91Y11 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.08■□□□□ 0.01
Pcdha9Q91Y11 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdha9Q91Y11 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdha9Q91Y11 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdha9Q91Y11 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Gm27321-201ENSMUST00000185021 205 ntBASIC15.08■□□□□ 0
Pcdha9Q91Y11 Gm33320-201ENSMUST00000192232 530 ntBASIC15.08■□□□□ 0
Pcdha9Q91Y11 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Pcdha9Q91Y11 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.07■□□□□ 0
Pcdha9Q91Y11 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Gm27306-201ENSMUST00000183970 107 ntBASIC15.07■□□□□ 0
Pcdha9Q91Y11 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.07■□□□□ 0
Pcdha9Q91Y11 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha9Q91Y11 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms