Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Gm9719-201ENSMUST00000162765 543 ntBASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Gm6736-201ENSMUST00000166583 948 ntBASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Gm10253-201ENSMUST00000194270 940 ntBASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb1Q91Y08 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Gm5312-201ENSMUST00000203728 547 ntBASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Pcdhb1Q91Y08 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb1Q91Y08 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms