Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Gm18351-201ENSMUST00000188646 883 ntBASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Gm5264-201ENSMUST00000190584 848 ntBASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 AC106830.1-201ENSMUST00000228032 1003 ntBASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb3Q91XZ7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Gm7787-201ENSMUST00000216858 688 ntBASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdhb3Q91XZ7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb3Q91XZ7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms