Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga11Q91XY8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga11Q91XY8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga11Q91XY8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhga11Q91XY8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga11Q91XY8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhga11Q91XY8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga11Q91XY8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga11Q91XY8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhga11Q91XY8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Gm10275-202ENSMUST00000168697 495 ntBASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Gm18737-201ENSMUST00000173594 937 ntBASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Gm27920-201ENSMUST00000183953 96 ntBASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Gm10275-201ENSMUST00000092620 635 ntBASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhga11Q91XY8 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Gm26308-201ENSMUST00000157768 69 ntBASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Gm25925-201ENSMUST00000158314 306 ntBASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga11Q91XY8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Gm6973-201ENSMUST00000117080 721 ntBASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms