Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Gm5479-201ENSMUST00000160578 435 ntBASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Gm18737-201ENSMUST00000173594 937 ntBASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Gm20553-201ENSMUST00000204205 844 ntBASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga3Q91XY5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Gm27920-201ENSMUST00000183953 96 ntBASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Acot6-202ENSMUST00000222921 3622 ntBASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhga3Q91XY5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.39
Pcdhga3Q91XY5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhga3Q91XY5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms