Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Gm45668-201ENSMUST00000211271 493 ntBASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhgc5Q91XW9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Gm6222-201ENSMUST00000120787 396 ntBASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Gm27631-201ENSMUST00000184163 466 ntBASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc5Q91XW9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Matn2-206ENSMUST00000228570 2798 ntBASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Gm10766-202ENSMUST00000194123 606 ntBASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Gm37917-201ENSMUST00000194711 392 ntBASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc5Q91XW9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc5Q91XW9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhgc5Q91XW9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms