Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Gm5866-201ENSMUST00000177881 973 ntBASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Shd-206ENSMUST00000225145 998 ntBASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx41Q91VN6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm29310-201ENSMUST00000185468 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21825-201ENSMUST00000185728 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm29109-201ENSMUST00000185895 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21896-201ENSMUST00000186520 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21873-201ENSMUST00000186728 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21794-201ENSMUST00000187056 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21880-201ENSMUST00000187275 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21826-201ENSMUST00000187451 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21198-201ENSMUST00000188393 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21749-201ENSMUST00000189343 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21901-201ENSMUST00000189568 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm29424-201ENSMUST00000189716 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm28599-201ENSMUST00000189838 694 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21867-201ENSMUST00000189917 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm29269-201ENSMUST00000190087 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21722-201ENSMUST00000190153 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm28423-201ENSMUST00000190701 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21899-201ENSMUST00000190745 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21910-201ENSMUST00000191163 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21849-201ENSMUST00000191571 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm28678-201ENSMUST00000191593 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm20910-201ENSMUST00000193268 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm21871-201ENSMUST00000194621 696 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx41Q91VN6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx41Q91VN6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms