Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.5■□□□□ 0.23
StrcQ8VIM6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Gm11222-201ENSMUST00000119005 738 ntBASIC16.5■□□□□ 0.23
StrcQ8VIM6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Gm30285-201ENSMUST00000214614 422 ntBASIC16.5■□□□□ 0.23
StrcQ8VIM6 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
StrcQ8VIM6 Gm11637-201ENSMUST00000120601 592 ntBASIC16.49■□□□□ 0.23
StrcQ8VIM6 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.49■□□□□ 0.23
StrcQ8VIM6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.49■□□□□ 0.23
StrcQ8VIM6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Gm22334-201ENSMUST00000158070 133 ntBASIC16.49■□□□□ 0.23
StrcQ8VIM6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Mir6979-201ENSMUST00000183927 56 ntBASIC16.49■□□□□ 0.23
StrcQ8VIM6 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Efs-202ENSMUST00000227037 2540 ntBASIC16.49■□□□□ 0.23
StrcQ8VIM6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Gm8584-201ENSMUST00000171982 758 ntBASIC16.49■□□□□ 0.23
StrcQ8VIM6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.49■□□□□ 0.23
StrcQ8VIM6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
StrcQ8VIM6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Gm38144-201ENSMUST00000192790 465 ntBASIC16.48■□□□□ 0.23
StrcQ8VIM6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.48■□□□□ 0.23
StrcQ8VIM6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.48■□□□□ 0.23
StrcQ8VIM6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.48■□□□□ 0.23
StrcQ8VIM6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
StrcQ8VIM6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
StrcQ8VIM6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
StrcQ8VIM6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
StrcQ8VIM6 Gm14028-201ENSMUST00000117434 479 ntBASIC16.47■□□□□ 0.23
StrcQ8VIM6 Gm7857-201ENSMUST00000117957 358 ntBASIC16.47■□□□□ 0.23
StrcQ8VIM6 Mir5120-201ENSMUST00000175020 78 ntBASIC16.47■□□□□ 0.23
StrcQ8VIM6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
StrcQ8VIM6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
StrcQ8VIM6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
StrcQ8VIM6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms