Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Gm7461-201ENSMUST00000058918 827 ntBASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh18Q8VHR0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh18Q8VHR0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh18Q8VHR0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh18Q8VHR0 Pck2-205ENSMUST00000226352 2784 ntBASIC13.71□□□□□ -0.22
Pcdh18Q8VHR0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh18Q8VHR0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh18Q8VHR0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Gm13884-201ENSMUST00000118103 829 ntBASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Gm18246-201ENSMUST00000221023 728 ntBASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh18Q8VHR0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms