Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Gm13418-201ENSMUST00000119097 944 ntBASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Gm8584-201ENSMUST00000171982 758 ntBASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Gm2451-201ENSMUST00000199447 999 ntBASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Gm10290-201ENSMUST00000200451 999 ntBASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa1Q8VEE4 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Gm6089-201ENSMUST00000197666 938 ntBASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Birc2-201ENSMUST00000054878 378 ntBASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms