Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Gm23547-201ENSMUST00000158210 271 ntBASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Gm16215-201ENSMUST00000161990 637 ntBASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Gm7730-201ENSMUST00000212486 454 ntBASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Syt7-204ENSMUST00000223586 1344 ntBASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Gm15653-201ENSMUST00000119247 907 ntBASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ndc1Q8VCB1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.4□□□□□ -0.27
Ndc1Q8VCB1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Gm44855-201ENSMUST00000205725 362 ntBASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ndc1Q8VCB1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms