Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Matn2-206ENSMUST00000228570 2798 ntBASIC13.61□□□□□ -0.23
Lsm1Q8VC85 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm1Q8VC85 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gm18737-201ENSMUST00000173594 937 ntBASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gm45612-201ENSMUST00000211320 160 ntBASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm1Q8VC85 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gm2810-201ENSMUST00000118681 990 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gm17271-201ENSMUST00000165535 355 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms