Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Gm15653-201ENSMUST00000119247 907 ntBASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Mir1897-201ENSMUST00000122581 272 ntBASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Gm27618-201ENSMUST00000183671 60 ntBASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpap2Q8VC34 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Gm6916-202ENSMUST00000205523 195 ntBASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.56■□□□□ 0.08
Rpap2Q8VC34 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpap2Q8VC34 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.55■□□□□ 0.08
Rpap2Q8VC34 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.55■□□□□ 0.08
Rpap2Q8VC34 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms