Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Gm45098-201ENSMUST00000207179 657 ntBASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Grk6-205ENSMUST00000224653 2976 ntBASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.59□□□□□ -0.55
Nup35Q8R4R6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nup35Q8R4R6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Nup35Q8R4R6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup35Q8R4R6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Gm6376-201ENSMUST00000209407 580 ntBASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.57□□□□□ -0.56
Nup35Q8R4R6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms